diff --git a/.changeset/flat-points-kick.md b/.changeset/flat-points-kick.md
new file mode 100644
index 0000000000..f9c8b8762c
--- /dev/null
+++ b/.changeset/flat-points-kick.md
@@ -0,0 +1,5 @@
+---
+'svelte': patch
+---
+
+fix: reset `is_flushing` if `flushSync` is called and there's no scheduled effect
diff --git a/packages/svelte/src/internal/client/runtime.js b/packages/svelte/src/internal/client/runtime.js
index 5920a05fc5..51402ac88c 100644
--- a/packages/svelte/src/internal/client/runtime.js
+++ b/packages/svelte/src/internal/client/runtime.js
@@ -688,6 +688,13 @@ export function flushSync(fn) {
 		flush_tasks();
 
 		if (queued_root_effects.length === 0) {
+			// this would be reset in `flush_queued_root_effects` but since we are early returning here,
+			// we need to reset it here as well in case the first time there's 0 queued root effects
+			is_flushing = false;
+			last_scheduled_effect = null;
+			if (DEV) {
+				dev_effect_stack = [];
+			}
 			return /** @type {T} */ (result);
 		}
 
diff --git a/packages/svelte/tests/runtime-runes/samples/flush-sync-no-scheduled/_config.js b/packages/svelte/tests/runtime-runes/samples/flush-sync-no-scheduled/_config.js
new file mode 100644
index 0000000000..33a59dfbd3
--- /dev/null
+++ b/packages/svelte/tests/runtime-runes/samples/flush-sync-no-scheduled/_config.js
@@ -0,0 +1,16 @@
+import { ok, test } from '../../test';
+
+export default test({
+	async test({ assert, target }) {
+		const btn = target.querySelector('button');
+		const main = target.querySelector('main');
+		ok(main);
+		console.log(main.innerHTML);
+		assert.htmlEqual(main.innerHTML, `<div>true</div>`);
+		// we don't want to use flush sync (or tick that use it inside) since we are testing that calling `flushSync` once
+		// when there are no scheduled effects does not cause reactivity to break
+		btn?.click();
+		await Promise.resolve();
+		assert.htmlEqual(main.innerHTML, `<div>false</div> <div>false</div>`);
+	}
+});
diff --git a/packages/svelte/tests/runtime-runes/samples/flush-sync-no-scheduled/main.svelte b/packages/svelte/tests/runtime-runes/samples/flush-sync-no-scheduled/main.svelte
new file mode 100644
index 0000000000..448d495cf5
--- /dev/null
+++ b/packages/svelte/tests/runtime-runes/samples/flush-sync-no-scheduled/main.svelte
@@ -0,0 +1,23 @@
+<script>
+	import { flushSync } from 'svelte'
+	
+	let flag = $state(true)
+	let test = $state(true);	
+</script>
+
+<button onclick={()=>{
+	flushSync(() => {
+		test = !test
+	})
+		
+	flag = !flag;
+}}>switch</button>
+
+<main>
+	<div>{flag}</div>
+	
+	{#if !flag}
+		<div>{test} </div>
+	{/if}
+</main>
+