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525 lines
18 KiB
525 lines
18 KiB
# Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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import logging
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import time
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from collections import defaultdict
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from pathlib import Path
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import numpy as np
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import paddle
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import paddle.nn as nn
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import pandas as pd
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from paddle import distributed as dist
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from paddle.io import DataLoader
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from sklearn.metrics import classification_report
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from sklearn.metrics import f1_score
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from sklearn.metrics import precision_recall_fscore_support
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from ...s2t.utils import layer_tools
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from ...s2t.utils import mp_tools
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from ...s2t.utils.checkpoint import Checkpoint
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from ...text.models import ErnieLinear
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from ...text.models.ernie_linear.dataset import PuncDataset
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from ...text.models.ernie_linear.dataset import PuncDatasetFromErnieTokenizer
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__all__ = ["Trainer", "Tester"]
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DefinedClassifier = {
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'ErnieLinear': ErnieLinear,
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}
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DefinedLoss = {
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"ce": nn.CrossEntropyLoss,
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}
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DefinedDataset = {
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'Punc': PuncDataset,
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'Ernie': PuncDatasetFromErnieTokenizer,
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}
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class Trainer():
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def __init__(self, config, args):
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self.config = config
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self.args = args
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self.optimizer = None
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self.output_dir = None
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self.log_dir = None
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self.checkpoint_dir = None
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self.iteration = 0
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self.epoch = 0
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def setup(self):
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"""Setup the experiment.
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"""
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self.setup_log_dir()
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self.setup_logger()
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if self.args.ngpu > 0:
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paddle.set_device('gpu')
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else:
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paddle.set_device('cpu')
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if self.parallel:
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self.init_parallel()
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self.setup_output_dir()
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self.dump_config()
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self.setup_checkpointer()
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self.setup_model()
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self.setup_dataloader()
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self.iteration = 0
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self.epoch = 1
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@property
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def parallel(self):
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"""A flag indicating whether the experiment should run with
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multiprocessing.
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"""
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return self.args.ngpu > 1
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def init_parallel(self):
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"""Init environment for multiprocess training.
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"""
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dist.init_parallel_env()
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@mp_tools.rank_zero_only
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def save(self, tag=None, infos: dict=None):
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"""Save checkpoint (model parameters and optimizer states).
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Args:
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tag (int or str, optional): None for step, else using tag, e.g epoch. Defaults to None.
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infos (dict, optional): meta data to save. Defaults to None.
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"""
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infos = infos if infos else dict()
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infos.update({
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"step": self.iteration,
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"epoch": self.epoch,
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"lr": self.optimizer.get_lr()
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})
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self.checkpointer.save_parameters(self.checkpoint_dir, self.iteration
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if tag is None else tag, self.model,
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self.optimizer, infos)
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def resume_or_scratch(self):
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"""Resume from latest checkpoint at checkpoints in the output
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directory or load a specified checkpoint.
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If ``args.checkpoint_path`` is not None, load the checkpoint, else
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resume training.
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"""
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scratch = None
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infos = self.checkpointer.load_parameters(
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self.model,
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self.optimizer,
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checkpoint_dir=self.checkpoint_dir,
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checkpoint_path=self.args.checkpoint_path)
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if infos:
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# restore from ckpt
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self.iteration = infos["step"]
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self.epoch = infos["epoch"]
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scratch = False
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else:
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self.iteration = 0
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self.epoch = 0
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scratch = True
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return scratch
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def new_epoch(self):
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"""Reset the train loader seed and increment `epoch`.
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"""
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self.epoch += 1
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if self.parallel:
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self.train_loader.batch_sampler.set_epoch(self.epoch)
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def train(self):
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"""The training process control by epoch."""
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from_scratch = self.resume_or_scratch()
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if from_scratch:
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# save init model, i.e. 0 epoch
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self.save(tag="init")
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self.lr_scheduler.step(self.iteration)
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if self.parallel:
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self.train_loader.batch_sampler.set_epoch(self.epoch)
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self.logger.info(
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f"Train Total Examples: {len(self.train_loader.dataset)}")
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self.punc_list = []
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for i in range(len(self.train_loader.dataset.id2punc)):
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self.punc_list.append(self.train_loader.dataset.id2punc[i])
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while self.epoch < self.config["training"]["n_epoch"]:
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self.model.train()
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self.total_label_train = []
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self.total_predict_train = []
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try:
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data_start_time = time.time()
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for batch_index, batch in enumerate(self.train_loader):
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dataload_time = time.time() - data_start_time
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msg = "Train: Rank: {}, ".format(dist.get_rank())
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msg += "epoch: {}, ".format(self.epoch)
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msg += "step: {}, ".format(self.iteration)
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msg += "batch : {}/{}, ".format(batch_index + 1,
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len(self.train_loader))
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msg += "lr: {:>.8f}, ".format(self.lr_scheduler())
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msg += "data time: {:>.3f}s, ".format(dataload_time)
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self.train_batch(batch_index, batch, msg)
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data_start_time = time.time()
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# t = classification_report(
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# self.total_label_train,
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# self.total_predict_train,
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# target_names=self.punc_list)
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# self.logger.info(t)
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except Exception as e:
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self.logger.error(e)
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raise e
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total_loss, F1_score = self.valid()
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self.logger.info("Epoch {} Val info val_loss {}, F1_score {}".
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format(self.epoch, total_loss, F1_score))
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self.save(
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tag=self.epoch, infos={"val_loss": total_loss,
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"F1": F1_score})
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# step lr every epoch
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self.lr_scheduler.step()
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self.new_epoch()
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def run(self):
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"""The routine of the experiment after setup. This method is intended
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to be used by the user.
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"""
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try:
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self.train()
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except KeyboardInterrupt:
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self.logger.info("Training was aborted by keybord interrupt.")
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self.save()
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exit(-1)
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finally:
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self.destory()
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self.logger.info("Training Done.")
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def setup_output_dir(self):
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"""Create a directory used for output.
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"""
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# output dir
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output_dir = Path(self.args.output_dir).expanduser()
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output_dir.mkdir(parents=True, exist_ok=True)
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self.output_dir = output_dir
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def setup_log_dir(self):
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"""Create a directory used for logging.
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"""
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# log dir
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log_dir = Path(self.args.log_dir).expanduser()
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log_dir.mkdir(parents=True, exist_ok=True)
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self.log_dir = log_dir
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def setup_checkpointer(self):
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"""Create a directory used to save checkpoints into.
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It is "checkpoints" inside the output directory.
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"""
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# checkpoint dir
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self.checkpointer = Checkpoint(self.config["checkpoint"]["kbest_n"],
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self.config["checkpoint"]["latest_n"])
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checkpoint_dir = self.output_dir / "checkpoints"
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checkpoint_dir.mkdir(exist_ok=True)
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self.checkpoint_dir = checkpoint_dir
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def setup_logger(self):
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LOG_FORMAT = "%(asctime)s - %(pathname)s[line:%(lineno)d] - %(levelname)s: %(message)s"
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format_str = logging.Formatter(
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'%(asctime)s - %(pathname)s[line:%(lineno)d] - %(levelname)s: %(message)s'
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)
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logging.basicConfig(
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filename=self.config["training"]["log_path"],
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level=logging.INFO,
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format=LOG_FORMAT)
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self.logger = logging.getLogger(__name__)
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self.logger.setLevel(logging.INFO)
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sh = logging.StreamHandler()
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sh.setFormatter(format_str)
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self.logger.addHandler(sh)
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self.logger.info('info')
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@mp_tools.rank_zero_only
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def destory(self):
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pass
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@mp_tools.rank_zero_only
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def dump_config(self):
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"""Save the configuration used for this experiment.
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It is saved in to ``config.yaml`` in the output directory at the
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beginning of the experiment.
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"""
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with open(self.output_dir / "config.yaml", "wt") as f:
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print(self.config, file=f)
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def train_batch(self, batch_index, batch_data, msg):
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start = time.time()
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input, label = batch_data
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label = paddle.reshape(label, shape=[-1])
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y, logit = self.model(input)
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pred = paddle.argmax(logit, axis=1)
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self.total_label_train.extend(label.numpy().tolist())
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self.total_predict_train.extend(pred.numpy().tolist())
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loss = self.crit(y, label)
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loss.backward()
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layer_tools.print_grads(self.model, print_func=None)
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self.optimizer.step()
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self.optimizer.clear_grad()
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iteration_time = time.time() - start
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losses_np = {
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"train_loss": float(loss),
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}
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msg += "train time: {:>.3f}s, ".format(iteration_time)
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msg += "batch size: {}, ".format(self.config["data"]["batch_size"])
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msg += ", ".join("{}: {:>.6f}".format(k, v)
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for k, v in losses_np.items())
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self.logger.info(msg)
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self.iteration += 1
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@paddle.no_grad()
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def valid(self):
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self.logger.info(
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f"Valid Total Examples: {len(self.valid_loader.dataset)}")
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self.model.eval()
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valid_losses = defaultdict(list)
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num_seen_utts = 1
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total_loss = 0.0
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valid_total_label = []
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valid_total_predict = []
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for i, batch in enumerate(self.valid_loader):
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input, label = batch
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label = paddle.reshape(label, shape=[-1])
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y, logit = self.model(input)
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pred = paddle.argmax(logit, axis=1)
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valid_total_label.extend(label.numpy().tolist())
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valid_total_predict.extend(pred.numpy().tolist())
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loss = self.crit(y, label)
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if paddle.isfinite(loss):
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num_utts = batch[1].shape[0]
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num_seen_utts += num_utts
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total_loss += float(loss) * num_utts
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valid_losses["val_loss"].append(float(loss))
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if (i + 1) % self.config["training"]["log_interval"] == 0:
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valid_dump = {k: np.mean(v) for k, v in valid_losses.items()}
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valid_dump["val_history_loss"] = total_loss / num_seen_utts
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# logging
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msg = f"Valid: Rank: {dist.get_rank()}, "
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msg += "epoch: {}, ".format(self.epoch)
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msg += "step: {}, ".format(self.iteration)
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msg += "batch : {}/{}, ".format(i + 1, len(self.valid_loader))
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msg += ", ".join("{}: {:>.6f}".format(k, v)
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for k, v in valid_dump.items())
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self.logger.info(msg)
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self.logger.info("Rank {} Val info val_loss {}".format(
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dist.get_rank(), total_loss / num_seen_utts))
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F1_score = f1_score(
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valid_total_label, valid_total_predict, average="macro")
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return total_loss / num_seen_utts, F1_score
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def setup_model(self):
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config = self.config
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model = DefinedClassifier[self.config["model_type"]](
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**self.config["model_params"])
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self.crit = DefinedLoss[self.config["loss_type"]](**self.config[
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"loss"]) if "loss_type" in self.config else DefinedLoss["ce"]()
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if self.parallel:
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model = paddle.DataParallel(model)
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# self.logger.info(f"{model}")
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# layer_tools.print_params(model, self.logger.info)
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lr_scheduler = paddle.optimizer.lr.ExponentialDecay(
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learning_rate=config["training"]["lr"],
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gamma=config["training"]["lr_decay"],
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verbose=True)
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optimizer = paddle.optimizer.Adam(
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learning_rate=lr_scheduler,
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parameters=model.parameters(),
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weight_decay=paddle.regularizer.L2Decay(
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config["training"]["weight_decay"]))
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self.model = model
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self.optimizer = optimizer
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self.lr_scheduler = lr_scheduler
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self.logger.info("Setup model/criterion/optimizer/lr_scheduler!")
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def setup_dataloader(self):
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config = self.config["data"].copy()
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train_dataset = DefinedDataset[config["dataset_type"]](
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train_path=config["train_path"], **config["data_params"])
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dev_dataset = DefinedDataset[config["dataset_type"]](
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train_path=config["dev_path"], **config["data_params"])
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self.train_loader = DataLoader(
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train_dataset,
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num_workers=config["num_workers"],
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batch_size=config["batch_size"])
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self.valid_loader = DataLoader(
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dev_dataset,
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batch_size=config["batch_size"],
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shuffle=False,
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drop_last=False,
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num_workers=config["num_workers"])
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self.logger.info("Setup train/valid Dataloader!")
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class Tester(Trainer):
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def __init__(self, config, args):
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super().__init__(config, args)
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@mp_tools.rank_zero_only
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@paddle.no_grad()
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def test(self):
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self.logger.info(
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f"Test Total Examples: {len(self.test_loader.dataset)}")
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self.punc_list = []
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for i in range(len(self.test_loader.dataset.id2punc)):
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self.punc_list.append(self.test_loader.dataset.id2punc[i])
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self.model.eval()
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test_total_label = []
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test_total_predict = []
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with open(self.args.result_file, 'w') as fout:
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for i, batch in enumerate(self.test_loader):
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input, label = batch
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label = paddle.reshape(label, shape=[-1])
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y, logit = self.model(input)
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pred = paddle.argmax(logit, axis=1)
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test_total_label.extend(label.numpy().tolist())
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test_total_predict.extend(pred.numpy().tolist())
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# logging
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msg = "Test: "
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msg += "epoch: {}, ".format(self.epoch)
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msg += "step: {}, ".format(self.iteration)
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self.logger.info(msg)
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t = classification_report(
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test_total_label, test_total_predict, target_names=self.punc_list)
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print(t)
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t2 = self.evaluation(test_total_label, test_total_predict)
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print(t2)
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def evaluation(self, y_pred, y_test):
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precision, recall, f1, _ = precision_recall_fscore_support(
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y_test, y_pred, average=None, labels=[1, 2, 3])
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overall = precision_recall_fscore_support(
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y_test, y_pred, average='macro', labels=[1, 2, 3])
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result = pd.DataFrame(
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np.array([precision, recall, f1]),
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columns=list(['O', 'COMMA', 'PERIOD', 'QUESTION'])[1:],
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index=['Precision', 'Recall', 'F1'])
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result['OVERALL'] = overall[:3]
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return result
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def run_test(self):
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self.resume_or_scratch()
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try:
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self.test()
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except KeyboardInterrupt:
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self.logger.info("Testing was aborted by keybord interrupt.")
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exit(-1)
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def setup(self):
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"""Setup the experiment.
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"""
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if self.args.ngpu > 0:
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paddle.set_device('gpu')
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else:
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paddle.set_device('cpu')
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self.setup_logger()
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self.setup_output_dir()
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self.setup_checkpointer()
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self.setup_dataloader()
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self.setup_model()
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self.iteration = 0
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self.epoch = 0
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def setup_model(self):
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config = self.config
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model = DefinedClassifier[self.config["model_type"]](
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**self.config["model_params"])
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self.model = model
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self.logger.info("Setup model!")
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def setup_dataloader(self):
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config = self.config["data"].copy()
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test_dataset = DefinedDataset[config["dataset_type"]](
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train_path=config["test_path"], **config["data_params"])
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self.test_loader = DataLoader(
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test_dataset,
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batch_size=config["batch_size"],
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shuffle=False,
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drop_last=False)
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self.logger.info("Setup test Dataloader!")
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def setup_output_dir(self):
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"""Create a directory used for output.
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"""
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# output dir
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if self.args.output_dir:
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output_dir = Path(self.args.output_dir).expanduser()
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output_dir.mkdir(parents=True, exist_ok=True)
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else:
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output_dir = Path(
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self.args.checkpoint_path).expanduser().parent.parent
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output_dir.mkdir(parents=True, exist_ok=True)
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self.output_dir = output_dir
|
|
|
|
def setup_logger(self):
|
|
LOG_FORMAT = "%(asctime)s - %(pathname)s[line:%(lineno)d] - %(levelname)s: %(message)s"
|
|
format_str = logging.Formatter(
|
|
'%(asctime)s - %(pathname)s[line:%(lineno)d] - %(levelname)s: %(message)s'
|
|
)
|
|
logging.basicConfig(
|
|
filename=self.config["testing"]["log_path"],
|
|
level=logging.INFO,
|
|
format=LOG_FORMAT)
|
|
self.logger = logging.getLogger(__name__)
|
|
|
|
self.logger.setLevel(logging.INFO)
|
|
sh = logging.StreamHandler()
|
|
sh.setFormatter(format_str)
|
|
self.logger.addHandler(sh)
|
|
|
|
self.logger.info('info')
|