IoT-For-Beginners/2-farm/lessons/1-predict-plant-growth/code-notebook/gdd.ipynb

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    "# Growing Degree Days\n",
    "\n",
    "This notebook loads temperature data saved in a CSV file, and analyzes it. It plots the temperatures, shows the highest and lowest value for each day, and calculates the GDD.\n",
    "\n",
    "To use this notebook:\n",
    "\n",
    "* Copy the `temperature.csv` file into the same folder as this notebook\n",
    "* Run all the cells using the **▶︎ Run** button above. This will run the selected cell, then move to the next one."
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "In the cell below, set `base_temperature` to the base temperature of the plant."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [],
   "source": [
    "base_temperature = 10"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "The CSV file now needs to be loaded, using pandas"
   ]
  },
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   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "import pandas as pd\n",
    "import matplotlib.pyplot as plt\n",
    "\n",
    "# Read the temperature CSV file\n",
    "df = pd.read_csv('temperature.csv')"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "The temperature can now be plotted on a graph."
   ]
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   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "plt.figure(figsize=(20, 10))\n",
    "plt.plot(df['date'], df['temperature'])\n",
    "plt.xticks(rotation='vertical');"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Once the data has been read it can be grouped by the `date` column, and the minimum and maximum temperatures extracted for each date."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
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   "outputs": [],
   "source": [
    "# Convert datetimes to pure dates so we can group by the date\n",
    "df['date'] = pd.to_datetime(df['date']).dt.date\n",
    "\n",
    "# Group the data by date so it can be analyzed by date\n",
    "data_by_date = df.groupby('date')\n",
    "\n",
    "# Get the minimum and maximum temperatures for each date\n",
    "min_by_date = data_by_date.min()\n",
    "max_by_date = data_by_date.max()\n",
    "\n",
    "# Join the min and max temperatures into one dataframe and flatten it\n",
    "min_max_by_date = min_by_date.join(max_by_date, on='date', lsuffix='_min', rsuffix='_max')\n",
    "min_max_by_date = min_max_by_date.reset_index()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "The GDD can be calculated using the standard GDD equation"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "def calculate_gdd(row):\n",
    "    return ((row['temperature_max'] + row['temperature_min']) / 2) - base_temperature\n",
    "\n",
    "# Calculate the GDD for each row\n",
    "min_max_by_date['gdd'] = min_max_by_date.apply (lambda row: calculate_gdd(row), axis=1)\n",
    "\n",
    "# Print the results\n",
    "print(min_max_by_date[['date', 'gdd']].to_string(index=False))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
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